ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7kadA4 - ECOD Domain | ECOD

ECOD/Domains/e7kadA4

e7kadA4

UID: 002820374

PDB

Range: A:829-966
PDB: 7KAD chain A(all domains)

Molecule: Isoform 2 of Neutral alpha-glucosidase AB

3D Structure

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Related Domains

Browse other domains in DUF5110 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupPutative glucosidase YicI, C-terminal domain(4178)

HH-groupPutative glucosidase YicI, C-terminal domain(4178.1)

TT-groupPutative glucosidase YicI, C-terminal domain(4178.1.1)

FFamilyDUF5110(4178.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metalwithin 5 Å only

+ 4 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Triethylene glycol, …)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF17137DUF5110

Domain of unknown function (DUF5110)

External Links

ECOD PDB View: 7KAD RCSB PDB: 7KAD PDBe: 7KAD

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Triethylene glycolPGE

Sulfate ionSO4

Shown in the structure viewer. Drug annotations from DrugDomain.