ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7a9gBBB3 - ECOD Domain | ECOD

ECOD/Domains/e7a9gBBB3

e7a9gBBB3

UID: 002842915

PDB

Range: BBB:479-612
PDB: 7A9G chain BBB(all domains)

Molecule: 1-deoxy-D-xylulose-5-phosphate synthase,1-deoxy-D-xylulose-5-phosphate synthase

3D Structure

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Related Domains

Browse other domains in Transketolase_C →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupTK C-terminal domain-like(7522)

HH-groupTK C-terminal domain-like(7522.1)

TT-groupTK C-terminal domain-like(7522.1.1)

FFamilyTransketolase_C(7522.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Glycerin, Triethylene glycol, DI(HYDROXYETHYL)ETHER, …)

GlycerinGOL
DrugBank DB09462
Triethylene glycolPGE
DrugBank DB02327
DI(HYDROXYETHYL)ETHER

Pfam Families

PF02780Transketolase_C

Transketolase, C-terminal domain

ClanCL0591TKC_like

External Links

ECOD PDB View: 7A9G RCSB PDB: 7A9G PDBe: 7A9G

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.