ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7lrfB1 - ECOD Domain | ECOD

ECOD/Domains/e7lrfB1

e7lrfB1

UID: 002846323

PDB

Range: B:287-341
PDB: 7LRF chain B(all domains)

Molecule: Netrin-1

3D Structure

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Related Domains

Browse other domains in EGF_LMN_ATRN →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupEGF-like(389)

HH-groupEGF-related(389.1)

TT-groupEGF/Laminin(389.1.1)

FFamilyEGF_LMN_ATRN(389.1.1.53)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF24973EGF_LMN_ATRN

Laminin/attractin EGF domain

ClanCL0001EGF

External Links

ECOD PDB View: 7LRF RCSB PDB: 7LRF PDBe: 7LRF

Downloads

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