ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7odnB1 - ECOD Domain | ECOD

ECOD/Domains/e7odnB1

e7odnB1

UID: 002849736

PDB

Range: B:2-245
PDB: 7ODN chain B(all domains)

Molecule: Tubulin beta-3 chain

3D Structure

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Related Domains

Browse other domains in Tubulin, Misat_Tub_SegII →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin, Misat_Tub_SegII(2003.1.6.7)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
MebendazoleV95
drugDrugBank DB00643

+ 1 additive (Sulfate ion)

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

PF10644Misat_Tub_SegII

Misato Segment II tubulin-like domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 7ODN RCSB PDB: 7ODN PDBe: 7ODN

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.