ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vb991 - ECOD Domain | ECOD

ECOD/Domains/e7vb991

e7vb991

UID: 002869486

PDB

Range: 9:1-54
PDB: 7VB9 chain 9(all domains)

Molecule: Light-harvesting protein B-875 alpha chain

3D Structure

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Related Domains

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Classification

AArchitectureextended segments(a.20)

XX-groupBacterial light-harvesting complex subunits(5074)

HH-groupBacterial light-harvesting complex subunits(5074.1)

TT-groupBacterial light-harvesting complex subunits(5074.1.1)

FFamilyLHC(5074.1.1.1)

Ligands

in contact, ≤ 4 Å

Bacteriochlorophyll ABCL
drugDrugBank DB01853
UbidecarenoneU10
drugDrugBank DB09270within 5 Å only

Pfam Families

Antenna complex alpha/beta subunit

External Links

ECOD PDB View: 7VB9 RCSB PDB: 7VB9 PDBe: 7VB9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

SpheroideneSPO

1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEPC1

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.