ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vd5o1 - ECOD Domain | ECOD

ECOD/Domains/e7vd5o1

e7vd5o1

UID: 002869935

PDB

Range: o:3-247
PDB: 7VD5 chain o(all domains)

Molecule: Extrinsic protein in photosystem II

3D Structure

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Related Domains

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Classification

AArchitecturebeta barrels(a.1)

XX-groupOuter membrane meander beta-barrels(5084)

HH-groupOMPA-like(5084.1)

TT-groupOMPA-like(5084.1.1)

FFamilyMSP(5084.1.1.3)

Ligands

in contact, ≤ 4 Å

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD
within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Manganese-stabilising protein / photosystem II polypeptide

ClanCL0193MBB

External Links

ECOD PDB View: 7VD5 RCSB PDB: 7VD5 PDBe: 7VD5

Downloads

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