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PDB 7VD5

ELECTRON MICROSCOPY68 chains66 ECOD domains
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3D Structure(domains colored, ligands/nucleic acids shown)

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Domains by Chain

Chain 11Chlorophyll a/b-binding proteinview chain
1 domain
Chain 12Fcpb2, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 13Chlorophyll a/b-binding proteinview chain
1 domain
Chain 14Chlorophyll a/b-binding proteinview chain
1 domain
Chain 15Chlorophyll a/b-binding proteinview chain
1 domain
Chain 16Fcpb3, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 17Fcpb4, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 18Chlorophyll a/b-binding proteinview chain
1 domain
Chain 19Fcpb5, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 20Fcpb6, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 21Fcpb7, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 31Chlorophyll a/b-binding proteinview chain
1 domain
Chain 32Fcpb2, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 33Chlorophyll a/b-binding proteinview chain
1 domain
Chain 34Chlorophyll a/b-binding proteinview chain
1 domain
Chain 35Chlorophyll a/b-binding proteinview chain
1 domain
Chain 36Fcpb3, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 37Fcpb4, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 38Chlorophyll a/b-binding proteinview chain
1 domain
Chain 39Fcpb5, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 40Fcpb6, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain 41Fcpb7, Fucoxanthin chlorophyll a/c-binding proteinview chain
1 domain
Chain aPhotosystem II protein D1view chain
1 domain
Chain APhotosystem II protein D1view chain
1 domain
Chain bPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain BPhotosystem II CP47 reaction center proteinview chain
2 domains
Chain cPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain CPhotosystem II CP43 reaction center proteinview chain
1 domain
Chain dPhotosystem II D2 proteinview chain
1 domain
Chain DPhotosystem II D2 proteinview chain
1 domain
Chain eCytochrome b559 subunit alphaview chain
1 domain
Chain ECytochrome b559 subunit alphaview chain
1 domain
Chain fCytochrome b559 subunit betaview chain
1 domain
Chain FCytochrome b559 subunit betaview chain
1 domain
Chain hPhotosystem II reaction center protein Hview chain
1 domain
Chain HPhotosystem II reaction center protein Hview chain
1 domain
Chain iPhotosystem II reaction center protein Iview chain
1 domain
Chain IPhotosystem II reaction center protein Iview chain
1 domain
Chain jPhotosystem II reaction center protein Jview chain
1 domain
Chain JPhotosystem II reaction center protein Jview chain
1 domain
Chain kPhotosystem II reaction center protein Kview chain
1 domain
Chain KPhotosystem II reaction center protein Kview chain
1 domain
Chain lPhotosystem II reaction center protein Lview chain
1 domain
Chain LPhotosystem II reaction center protein Lview chain
1 domain
Chain mPhotosystem II subunitview chain
1 domain
Chain MPhotosystem II subunitview chain
1 domain
Chain oExtrinsic protein in photosystem IIview chain
1 domain
Chain OExtrinsic protein in photosystem IIview chain
1 domain
Chain qExtrinsic protein in photosystem IIview chain
1 domain
Chain QExtrinsic protein in photosystem IIview chain
1 domain
Chain tPhotosystem II reaction center protein Tview chain
1 domain
Chain TPhotosystem II reaction center protein Tview chain
1 domain
Chain uExtrinsic protein in photosystem IIview chain
1 domain
Chain UExtrinsic protein in photosystem IIview chain
1 domain
Chain vCytochrome c-550view chain
1 domain
Chain VCytochrome c-550view chain
1 domain
Chain wPhotosystem II reaction center protein Wview chain
1 domain
Chain WPhotosystem II reaction center protein Wview chain
1 domain
Chain xPhotosystem II reaction center X proteinview chain
1 domain
Chain XPhotosystem II reaction center X proteinview chain
1 domain
Chain yPhotosystem II reaction center protein Ycf12view chain
1 domain
Chain YPhotosystem II reaction center protein Ycf12view chain
1 domain
Chain zPhotosystem II reaction center protein Zview chain
1 domain
Chain ZPhotosystem II reaction center protein Zview chain
1 domain

All Domains (66)

#ChainDomain IDRangeFamilyClassification
111e7vd511111:31-183Chloroa_b-bind5077 → 5077.1 → 5077.1.1
212e7vd512112:31-199Chloroa_b-bind5077 → 5077.1 → 5077.1.1
313e7vd513113:31-199Chloroa_b-bind5077 → 5077.1 → 5077.1.1
414e7vd514114:31-202Chloroa_b-bind5077 → 5077.1 → 5077.1.1
515e7vd515115:31-200Chloroa_b-bind5077 → 5077.1 → 5077.1.1
616e7vd516116:32-184Chloroa_b-bind5077 → 5077.1 → 5077.1.1
717e7vd517117:31-183Chloroa_b-bind5077 → 5077.1 → 5077.1.1
818e7vd518118:31-198Chloroa_b-bind5077 → 5077.1 → 5077.1.1
919e7vd519119:42-268Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1020e7vd520120:29-183Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1121e7vd521121:35-196Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1231e7vd531131:31-183Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1332e7vd532132:31-199Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1433e7vd533133:31-199Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1534e7vd534134:31-202Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1635e7vd535135:31-200Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1736e7vd536136:32-184Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1837e7vd537137:31-183Chloroa_b-bind5077 → 5077.1 → 5077.1.1
1938e7vd538138:31-198Chloroa_b-bind5077 → 5077.1 → 5077.1.1
2039e7vd539139:42-268Chloroa_b-bind5077 → 5077.1 → 5077.1.1
2140e7vd540140:29-183Chloroa_b-bind5077 → 5077.1 → 5077.1.1
2241e7vd541141:35-196Chloroa_b-bind5077 → 5077.1 → 5077.1.1
23ae7vd5a1a:11-344Photo_RC5037 → 5037.1 → 5037.1.1
24Ae7vd5A1A:11-344Photo_RC5037 → 5037.1 → 5037.1.1
25be7vd5b1b:2-328,b:445-485PSII5075 → 5075.1 → 5075.1.1
26be7vd5b2b:329-444PSII3744 → 3744.1 → 3744.1.1
27Be7vd5B1B:2-328,B:445-485PSII5075 → 5075.1 → 5075.1.1
28Be7vd5B2B:329-444PSII3744 → 3744.1 → 3744.1.1
29ce7vd5c1c:21-471PSII5075 → 5075.1 → 5075.1.1
30Ce7vd5C1C:21-471PSII5075 → 5075.1 → 5075.1.1
31de7vd5d1d:11-351Photo_RC5037 → 5037.1 → 5037.1.1
32De7vd5D1D:11-351Photo_RC5037 → 5037.1 → 5037.1.1
33ee7vd5e1e:9-83Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
34Ee7vd5E1E:9-83Cytochrom_B559,Cytochrom_B559a5036 → 5036.1 → 5036.1.1
35fe7vd5f1f:16-43Cytochrom_B5595036 → 5036.1 → 5036.1.1
36Fe7vd5F1F:16-43Cytochrom_B5595036 → 5036.1 → 5036.1.1
37he7vd5h1h:2-67PsbH5032 → 5032.1 → 5032.1.1
38He7vd5H1H:2-67PsbH5032 → 5032.1 → 5032.1.1
39ie7vd5i1i:1-35PsbI5035 → 5035.1 → 5035.1.1
40Ie7vd5I1I:1-35PsbI5035 → 5035.1 → 5035.1.1
41je7vd5j1j:6-39PsbJ5031 → 5031.1 → 5031.1.1
42Je7vd5J1J:6-39PsbJ5031 → 5031.1 → 5031.1.1
43ke7vd5k1k:8-44PsbK5034 → 5034.1 → 5034.1.1
44Ke7vd5K1K:8-44PsbK5034 → 5034.1 → 5034.1.1
45le7vd5l1l:1-38PsbL5030 → 5030.1 → 5030.1.1
46Le7vd5L1L:1-38PsbL5030 → 5030.1 → 5030.1.1
47me7vd5m1m:2-435033.1.1.05033 → 5033.1 → 5033.1.1
48Me7vd5M1M:2-435033.1.1.05033 → 5033.1 → 5033.1.1
49oe7vd5o1o:3-247MSP5084 → 5084.1 → 5084.1.1
50Oe7vd5O1O:3-247MSP5084 → 5084.1 → 5084.1.1
51qe7vd5q1q:56-206601.18.1.0601 → 601.18 → 601.18.1
52Qe7vd5Q1Q:56-206601.18.1.0601 → 601.18 → 601.18.1
53te7vd5t1t:1-30PsbT3390 → 3390.1 → 3390.1.1
54Te7vd5T1T:1-30PsbT3390 → 3390.1 → 3390.1.1
55ue7vd5u1u:10-102PsbU102 → 102.1 → 102.1.1
56Ue7vd5U1U:10-102PsbU102 → 102.1 → 102.1.1
57ve7vd5v1v:2-137Cytochrom_C550107 → 107.1 → 107.1.1
58Ve7vd5V1V:2-137Cytochrom_C550107 → 107.1 → 107.1.1
59we7vd5w1w:20-711084.1.1.01084 → 1084.1 → 1084.1.1
60We7vd5W1W:20-711084.1.1.01084 → 1084.1 → 1084.1.1
61xe7vd5x1x:1-37PsbX3493 → 3493.1 → 3493.1.1
62Xe7vd5X1X:1-37PsbX3493 → 3493.1 → 3493.1.1
63ye7vd5y1y:1-34PSII_Ycf123379 → 3379.1 → 3379.1.1
64Ye7vd5Y1Y:1-34PSII_Ycf123379 → 3379.1 → 3379.1.1
65ze7vd5z1z:1-59Ycf95044 → 5044.1 → 5044.1.1
66Ze7vd5Z1Z:1-59Ycf95044 → 5044.1 → 5044.1.1

Visualization Legend

ECOD domains (colored by index)Unclassified protein regionsNucleic acids (RNA/DNA)Ligands/cofactors