ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7vgbA2 - ECOD Domain | ECOD

ECOD/Domains/e7vgbA2

e7vgbA2

UID: 002870140

PDB

Range: A:29-438
PDB: 7VGB chain A(all domains)

Molecule: prolyl oligopeptidase

3D Structure

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Related Domains

Browse other domains in Peptidase_S9_N →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyPeptidase_S9_N(5.1.4.14)

Ligands

in contact, ≤ 4 Å

NICKEL (II) IONNI
metal

+ 4 additives (Glycerol, Imidazole, DI(HYDROXYETHYL)ETHER, …)

GlycerolGOL
ImidazoleIMD
DI(HYDROXYETHYL)ETHERPEG
2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOLTRS

Pfam Families

PF02897Peptidase_S9_N

Prolyl oligopeptidase, N-terminal beta-propeller domain

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 7VGB RCSB PDB: 7VGB PDBe: 7VGB

Downloads

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