ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7p7iBBB2 - ECOD Domain | ECOD

ECOD/Domains/e7p7iBBB2

e7p7iBBB2

UID: 002881696

PDB

Range: BBB:96-302
PDB: 7P7I chain BBB(all domains)

Molecule: Ubiquitin-like protein SMT3,N-acetyl-D-glucosamine kinase

3D Structure

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Related Domains

Browse other domains in ROK →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyROK(2484.1.1.8)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 4 additives (Triethylene glycol, Tromethamine, 1,2-ETHANEDIOL, …)

Triethylene glycolPGE
DrugBank DB02327
Tromethamine

Pfam Families

ROK family

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 7P7I RCSB PDB: 7P7I PDBe: 7P7I

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB03754

1,2-ETHANEDIOLEDO

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.