ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7p9yAAA1 - ECOD Domain | ECOD

ECOD/Domains/e7p9yAAA1

e7p9yAAA1

UID: 002881893

PDB

Range: AAA:96-302
PDB: 7P9Y chain AAA(all domains)

Molecule: Ubiquitin-like protein SMT3,N-acetyl-D-glucosamine kinase

3D Structure

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Related Domains

Browse other domains in ROK →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyROK(2484.1.1.8)

Ligands

in contact, ≤ 4 Å

N-acetyl-alpha-D-glucosamineNDG
drugDrugBank DB03740
Chloride ionCL
Potassium ionK

Pfam Families

ROK family

ClanCL0108Actin_ATPase

External Links

ECOD PDB View: 7P9Y RCSB PDB: 7P9Y PDBe: 7P9Y

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Zinc ionZN

metal

+ 4 additives ((4r)-2-Methylpentane-2,4-Diol, Triethylene glycol, 1,2-ETHANEDIOL, …)

(4r)-2-Methylpentane-2,4-DiolMPD
DrugBank DB03564
Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.