ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7kbjA2 - ECOD Domain | ECOD

ECOD/Domains/e7kbjA2

e7kbjA2

UID: 002905628

PDB

Range: A:829-966
PDB: 7KBJ chain A(all domains)

Molecule: Neutral alpha-glucosidase AB Trypsin-cleaved Fragment #3

3D Structure

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Related Domains

Browse other domains in DUF5110 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupPutative glucosidase YicI, C-terminal domain(4178)

HH-groupPutative glucosidase YicI, C-terminal domain(4178.1)

TT-groupPutative glucosidase YicI, C-terminal domain(4178.1.1)

FFamilyDUF5110(4178.1.1.1)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metalwithin 5 Å only

+ 5 additives (Sulfate ion, 1,2-ETHANEDIOL, Tetraethylene glycol, …)

Sulfate ionSO4
DrugBank DB14546

Pfam Families

PF17137DUF5110

Domain of unknown function (DUF5110)

External Links

ECOD PDB View: 7KBJ RCSB PDB: 7KBJ PDBe: 7KBJ

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

1,2-ETHANEDIOL

Tetraethylene glycolPG4

Triethylene glycolPGE

DI(HYDROXYETHYL)ETHERPEG

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.