ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7y7sA2 - ECOD Domain | ECOD

ECOD/Domains/e7y7sA2

e7y7sA2

UID: 002974403

PDB

Range: A:793-913,A:1031-1372
PDB: 7Y7S chain A(all domains)

Molecule: RNA-dependent RNA polymerase

3D Structure

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Related Domains

Browse other domains in RdRP →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupRNAi polymerase helical domain(3588)

HH-groupRNAi polymerase helical domain(3588.1)

TT-groupRNAi polymerase helical domain(3588.1.1)

FFamilyRdRP(3588.1.1.1)

Ligands

in contact, ≤ 4 Å

5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosineZAN
Calcium ionCA
metalwithin 5 Å only

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHER

Pfam Families

RNA dependent RNA polymerase

External Links

ECOD PDB View: 7Y7S RCSB PDB: 7Y7S PDBe: 7Y7S

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.