ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8doiA1 - ECOD Domain | ECOD

ECOD/Domains/e8doiA1

e8doiA1

UID: 002987809

PDB

Range: A:1-137
PDB: 8DOI chain A(all domains)

Molecule: Dehaloperoxidase B

3D Structure

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Related Domains

Browse other domains in Globin →

Classification

AArchitecturealpha arrays(a.6)

XX-groupGlobin-like(106)

HH-groupGlobin-like(106.1)

TT-groupGlobin-like(106.1.1)

FFamilyGlobin(106.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
2-(2-hydroxyphenyl)phenol5VL

+ 4 additives (Dimethyl sulfoxide, Glycerin, Sulfate ion, …)

Dimethyl sulfoxide

Pfam Families

Globin

ClanCL0090Globin

External Links

ECOD PDB View: 8DOI RCSB PDB: 8DOI PDBe: 8DOI

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB01093

GlycerinGOL

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.