ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7t08B1 - ECOD Domain | ECOD

ECOD/Domains/e7t08B1

e7t08B1

UID: 003001839

PDB

Range: B:2-349,B:371-519
PDB: 7T08 chain B(all domains)

Molecule: Protein farnesyltransferase subunit beta

3D Structure

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Related Domains

Browse other domains in Prenyltrans →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupalpha/alpha toroid(109.2)

TT-groupalpha/alpha toroid(109.2.1)

FFamilyPrenyltrans(109.2.1.1)

Ligands

in contact, ≤ 4 Å

Farnesyl diphosphateFPP
drugDrugBank DB07780
(2R)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid3FX
4-{[5-({(2S)-2-butyl-5-oxo-4-[3-(trifluoromethoxy)phenyl]piperazin-1-yl}methyl)-1H-imidazol-1-yl]methyl}-2-fluorobenzonitrile

Pfam Families

PF00432Prenyltrans

Prenyltransferase alpha-alpha toroid domain

ClanCL00596_Hairpin

External Links

ECOD PDB View: 7T08 RCSB PDB: 7T08 PDBe: 7T08

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Zinc ionZN

metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.