ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e7t0cA1 - ECOD Domain | ECOD

ECOD/Domains/e7t0cA1

e7t0cA1

UID: 003001846

PDB

Range: A:5-334
PDB: 7T0C chain A(all domains)

Molecule: Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha

3D Structure

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Related Domains

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Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

Farnesyl diphosphateFPP
drugDrugBank DB07780
(2R)-3-(cyclohexylamino)-2-hydroxypropane-1-sulfonic acid3FX
(5S)-5-butyl-4-({1-[(4-chlorophenyl)methyl]-1H-imidazol-5-yl}methyl)-1-[3-(trifluoromethoxy)phenyl]piperazin-2-one

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 7T0C RCSB PDB: 7T0C PDBe: 7T0C

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.