ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8eg6F1 - ECOD Domain | ECOD

ECOD/Domains/e8eg6F1

e8eg6F1

UID: 003028275

PDB

Range: F:197-291
PDB: 8EG6 chain F(all domains)

Molecule: Caspase-6 subunit p11

3D Structure

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Related Domains

Browse other domains in Peptidase_C14 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupCaspase-like(7575)

HH-groupCaspase-like(7575.1)

TT-groupCaspase-like(7575.1.1)

FFamilyPeptidase_C14(7575.1.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
(3R)-1-(ethanesulfonyl)-N-[4-(trifluoromethoxy)phenyl]piperidine-3-carboxamideUS9

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO

Pfam Families

PF00656Peptidase_C14

Caspase domain

ClanCL0093Peptidase_CD

External Links

ECOD PDB View: 8EG6 RCSB PDB: 8EG6 PDBe: 8EG6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.