ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8g6jSN2 - ECOD Domain | ECOD

ECOD/Domains/e8g6jSN2

e8g6jSN2

UID: 003031617

PDB

Range: SN:2-82
PDB: 8G6J chain SN(all domains)

Molecule: 40S ribosomal protein S13

3D Structure

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Related Domains

Browse other domains in Ribosomal_S13_N →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-group40S ribosomal protein S13 N-terminal domain(101.40)

TT-group40S ribosomal protein S13 N-terminal domain(101.40.1)

FFamilyRibosomal_S13_N(101.40.1.1)

Ligands

in contact, ≤ 4 Å

SpermidineSPD
drugDrugBank DB03566
Potassium ionK
metal
Magnesium ionMG

Pfam Families

PF08069Ribosomal_S13_N

Ribosomal S13/S15 N-terminal domain

External Links

ECOD PDB View: 8G6J RCSB PDB: 8G6J PDBe: 8G6J

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

metal

Shown in the structure viewer. Drug annotations from DrugDomain.