ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8auvf1 - ECOD Domain | ECOD

ECOD/Domains/e8auvf1

e8auvf1

UID: 003055912

PDB

Range: f:10-150
PDB: 8AUV chain f(all domains)

Molecule: uS9 (40S ribosomal protein S16)

3D Structure

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Related Domains

Browse other domains in Ribosomal_S9 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein S5 domain 2-like(212)

HH-groupRibosomal protein S5 domain 2-like(212.1)

TT-groupRibosomal protein S5 domain 2-like(212.1.1)

FFamilyRibosomal_S9(212.1.1.6)

Ligands

in contact, ≤ 4 Å

SpermidineSPD
drugDrugBank DB03566
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00380Ribosomal_S9

Ribosomal protein S9/S16

ClanCL0329S5

External Links

ECOD PDB View: 8AUV RCSB PDB: 8AUV PDBe: 8AUV

Downloads

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