ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8oinAX1 - ECOD Domain | ECOD

ECOD/Domains/e8oinAX1

e8oinAX1

UID: 003056695

PDB

Range: AX:45-345
PDB: 8OIN chain AX(all domains)

Molecule: Small ribosomal subunit protein mS29

3D Structure

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Related Domains

Browse other domains in DAP3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyDAP3(2004.1.1.172)

Ligands

in contact, ≤ 4 Å

ATPATP
drugDrugBank DB00171
Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ion

Pfam Families

Mitochondrial ribosomal death-associated protein 3

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 8OIN RCSB PDB: 8OIN PDBe: 8OIN

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.