ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8p2kBD1 - ECOD Domain | ECOD

ECOD/Domains/e8p2kBD1

e8p2kBD1

UID: 003058792

PDB

Range: BD:3-295
PDB: 8P2K chain BD(all domains)

Molecule: Ribosomal protein L5 eukaryotic C-terminal domain-containing protein

3D Structure

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Related Domains

Browse other domains in Ribosomal_L18_c,Ribosomal_L5e →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupRibonuclease H-like(2484)

HH-groupRibonuclease H-like(2484.1)

TT-groupRibonuclease H-like(2484.1.1)

FFamilyRibosomal_L18_c,Ribosomal_L5e(2484.1.1.69)

Ligands

in contact, ≤ 4 Å

Acetylamino-Acetic AcidAAC
drugDrugBank DB02713
Guanosine-5'-TriphosphateGTP
drugDrugBank DB04137

Pfam Families

PF14204Ribosomal_L18_c

Ribosomal L18 C-terminal region

PF17144Ribosomal_L5e

Ribosomal large subunit proteins 60S L5, and 50S L18

ClanCL0267S11_L18p

External Links

ECOD PDB View: 8P2K RCSB PDB: 8P2K PDBe: 8P2K

Downloads

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Unknown atom or ion

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.