ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8c29T1 - ECOD Domain | ECOD

ECOD/Domains/e8c29T1

e8c29T1

UID: 003059067

PDB

Range: T:1-31
PDB: 8C29 chain T(all domains)

Molecule: Photosystem II reaction center protein T

3D Structure

Loading viewer...

Related Domains

Browse other domains in PsbT →

Classification

AArchitectureextended segments(a.20)

XX-groupPhotosystem II reaction center protein T, PsbT(3390)

HH-groupPhotosystem II reaction center protein T, PsbT(3390.1)

TT-groupPhotosystem II reaction center protein T, PsbT(3390.1.1)

FFamilyPsbT(3390.1.1.1)

Ligands

in contact, ≤ 4 Å

1,2-Dipalmitoyl-Phosphatidyl-GlyceroleLHG
drugDrugBank DB02043
alpha-Linolenic acidLNL
drugDrugBank DB00132

Pfam Families

Photosystem II reaction centre T protein

External Links

ECOD PDB View: 8C29 RCSB PDB: 8C29 PDBe: 8C29

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Beta caroteneBCR

drugDrugBank DB06755within 5 Å only

1,2-DIACYL-GLYCEROL-3-SN-PHOSPHATE3PH

Chlorophyll aCLA

2,3-DIMETHYL-5-(3,7,11,15,19,23,27,31,35-NONAMETHYL-2,6,10,14,18,22,26,30,34-HEXATRIACONTANONAENYL-2,5-CYCLOHEXADIENE-1,4-DIONE-2,3-DIMETHYL-5-SOLANESYL-1,4-BENZOQUINONEPL9

1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROLSQD

Shown in the structure viewer. Drug annotations from DrugDomain.