ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ateA1 - ECOD Domain | ECOD

ECOD/Domains/e8ateA1

e8ateA1

UID: 003061640

PDB

Range: A:227-507
PDB: 8ATE chain A(all domains)

Molecule: FAD-binding PCMH-type domain-containing protein

3D Structure

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Related Domains

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Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFAD-linked oxidases, C-terminal domain(304.6)

TT-groupFAD-linked oxidases, C-terminal domain(304.6.1)

FFamilyBBE(304.6.1.3)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Pfam Families

Berberine and berberine like

ClanCL0277FAD-oxidase_C

External Links

ECOD PDB View: 8ATE RCSB PDB: 8ATE PDBe: 8ATE

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Chloride ionCL

Iodide ionIOD

Sodium ionNA

metal

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.