ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8ppkG1 - ECOD Domain | ECOD

ECOD/Domains/e8ppkG1

e8ppkG1

UID: 003064038

PDB

Range: G:1-240
PDB: 8PPK chain G(all domains)

Molecule: 40S ribosomal protein S6

3D Structure

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Related Domains

Browse other domains in Ribosomal_S6e →

Classification

AArchitecturebeta barrels(a.1)

XX-groupRibosomal protein L25-like(239)

HH-groupRibosomal protein L25-like(239.1)

TT-groupRibosomal protein L25-like(239.1.1)

FFamilyRibosomal_S6e(239.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
Unknown atom or ionUNX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01092Ribosomal_S6e

Ribosomal protein S6e

External Links

ECOD PDB View: 8PPK RCSB PDB: 8PPK PDBe: 8PPK

Downloads

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