ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8dl2D2 - ECOD Domain | ECOD

ECOD/Domains/e8dl2D2

e8dl2D2

UID: 003066237

PDB

Range: D:157-296
PDB: 8DL2 chain D(all domains)

Molecule: Alpha amylase, catalytic domain protein

3D Structure

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Related Domains

Browse other domains in CBM_48 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupImmunoglobulin-related(11.1)

TT-groupImmunoglobulin/Fibronectin type III/E set domains/PapD-like(11.1.1)

FFamilyCBM_48(11.1.1.47)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal

+ 2 additives (1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER)

1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

Carbohydrate-binding module 48 (Isoamylase N-terminal domain)

ClanCL0369GHD

External Links

ECOD PDB View: 8DL2 RCSB PDB: 8DL2 PDBe: 8DL2

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.