ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e8bb0B1 - ECOD Domain | ECOD

ECOD/Domains/e8bb0B1

e8bb0B1

UID: 003068354

PDB

Range: B:2-322
PDB: 8BB0 chain B(all domains)

Molecule: Surface layer protein

3D Structure

Loading viewer...

Related Domains

Browse other domains in DUF5074 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyDUF5074(5.1.4.58)

Ligands

in contact, ≤ 4 Å

HydroxocobalaminI2A
Sodium ionNA
metal
Thiocyanate ionSCN

+ 4 additives (Acetate, Glycerin, Triethylene glycol, …)

Pfam Families

PF16819DUF5074

Domain of unknown function (DUF5074)

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 8BB0 RCSB PDB: 8BB0 PDBe: 8BB0

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

AcetateACT

DrugBank DB14511

GlycerinGOL

DrugBank DB09462

Triethylene glycolPGE

DrugBank DB02327

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.