ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cgsA4 - ECOD Domain | ECOD

ECOD/Domains/e8cgsA4

e8cgsA4

UID: 003072378

PDB

Range: A:119-208,A:430-682
PDB: 8CGS chain A(all domains)

Molecule: Arsenite oxidase subunit AioA

3D Structure

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Related Domains

Browse other domains in Molybdopterin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2)

TT-groupFormate dehydrogenase/DMSO reductase, domains 2 and 3(2003.2.1)

FFamilyMolybdopterin(2003.2.1.1)

Ligands

in contact, ≤ 4 Å

MOLYBDENUM(IV) ION4MO
metal
Chloride ionCL
2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEMGD

Pfam Families

PF00384Molybdopterin

Molybdopterin oxidoreductase

External Links

ECOD PDB View: 8CGS RCSB PDB: 8CGS PDBe: 8CGS

Downloads

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Oxygen atom

O

tetrakis(oxidanyl)antimonyUJI

+ 5 additives (Tromethamine, Phosphate ion, Acetate ion, …)

TromethamineTRS
DrugBank DB03754
Phosphate ionPO4
DrugBank DB14523within 5 Å only
Acetate ionACT
GlycerolGOL
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.