ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8civQQ1 - ECOD Domain | ECOD

ECOD/Domains/e8civQQ1

e8civQQ1

UID: 003072522

PDB

Range: QQ:2-204
PDB: 8CIV chain QQ(all domains)

Molecule: 60S ribosomal protein L15-A

3D Structure

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Related Domains

Browse other domains in Ribosomal_L15e →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal proteins S24e, L23 and L15e(304.109)

TT-groupRibosomal proteins S24e, L23 and L15e(304.109.1)

FFamilyRibosomal_L15e(304.109.1.3)

Ligands

in contact, ≤ 4 Å

Potassium ionK
metal
Magnesium ionMG
metal
SpermidineSPD

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00827Ribosomal_L15e

Ribosomal L15

ClanCL0652S24e_L23_L15e

External Links

ECOD PDB View: 8CIV RCSB PDB: 8CIV PDBe: 8CIV

Downloads

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