ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e8cm4D1 - ECOD Domain | ECOD

ECOD/Domains/e8cm4D1

e8cm4D1

UID: 003072719

PDB

Range: D:2-73,D:138-215
PDB: 8CM4 chain D(all domains)

Molecule: Formate dehydrogenase, beta subunit, putative

3D Structure

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Related Domains

Browse other domains in Fer4_11 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4_11(205.1.1.17)

Ligands

in contact, ≤ 4 Å

Iron/sulfur clusterSF4

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13247Fer4_11

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 8CM4 RCSB PDB: 8CM4 PDBe: 8CM4

Downloads

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