ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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P48561_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/P48561_F1_nD2

P48561_F1_nD2

UID: 003170939

AlphaFold

Range: 301-475
AlphaFold: AF-P48561
UniProt: P48561 (all domains)
Gene: TRF5

Protein: Poly(A) RNA polymerase protein 1 (EC 2.7.7.19) (Topoisomerase 1-related protein TRF5)

3D Structure

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Related Domains

Browse other domains in PAP_assoc →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyPAP_assoc(102.1.3.1)

Pfam Families

PF03828PAP_assoc

Cid1 family poly A polymerase

External Links

AlphaFold DB: P48561 UniProt: P48561

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 301-475