ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q54VA7_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q54VA7_F1_nD2

Q54VA7_F1_nD2

UID: 003276179

AlphaFold

Range: 141-345,366-490
AlphaFold: AF-Q54VA7
UniProt: Q54VA7 (all domains)
Gene: jcdH

Protein: Transcription factor jumonji, jmjC domain-containing protein

3D Structure

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Related Domains

Browse other domains in JmjC, Cupin_8 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC, Cupin_8(10.12.1.101)

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

PF13621Cupin_8

Cupin-like domain

ClanCL0029Cupin

External Links

AlphaFold DB: Q54VA7 UniProt: Q54VA7

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 141-345,366-490