ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3c37B1 - ECOD Domain | ECOD

ECOD/Domains/e3c37B1

e3c37B1

UID: 000335925

PDB

Range: B:9-245
PDB: 3C37 chain B(all domains)
UniProt: Q74D82 (all domains)
Gene: GSU1437

Molecule: Peptidase, M48 family

3D Structure

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Related Domains

Browse other domains in Peptidase_M48 →

Classification

AArchitecturemixed a+b and a/b(a.18)

XX-groupZincin-like(2498)

HH-groupMetalloproteases ("zincins") catalytic domain(2498.1)

TT-groupMetalloproteases ("zincins") catalytic domain(2498.1.1)

FFamilyPeptidase_M48(2498.1.1.10)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01435Peptidase_M48

Peptidase family M48

ClanCL0126Peptidase_MA

External Links

ECOD PDB View: 3C37 RCSB PDB: 3C37 PDBe: 3C37 UniProt: Q74D82

Downloads

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