ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2parA1 - ECOD Domain | ECOD

ECOD/Domains/e2parA1

e2parA1

UID: 000337258

PDB

Range: A:2-187
PDB: 2PAR chain A(all domains)
UniProt: P76491 (all domains)
Gene: yfbR

Molecule: 5'-deoxynucleotidase YfbR

3D Structure

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Related Domains

Browse other domains in YfbR-like →

Classification

AArchitecturealpha complex topology(a.10)

XX-groupPDEase-like(131)

HH-groupHD-domain/PDEase-like(131.1)

TT-groupHD-domain/PDEase-like(131.1.1)

FFamilyYfbR-like(131.1.1.9)

Ligands

in contact, ≤ 4 Å

Thymidine monophosphateTMP
drugDrugBank DB01643
COBALT (II) IONCO
metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

Pfam Families

PF12917YfbR-like

5'-deoxynucleotidase YfbR-like

ClanCL0237HD_PDEase

External Links

ECOD PDB View: 2PAR RCSB PDB: 2PAR PDBe: 2PAR UniProt: P76491

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.