ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3cixA1 - ECOD Domain | ECOD

ECOD/Domains/e3cixA1

e3cixA1

UID: 000339309

PDB

Range: A:2-347
PDB: 3CIX chain A(all domains)
UniProt: Q9X0Z6 (all domains)
Gene: TM_1269

Molecule: FeFe-Hydrogenase maturase

3D Structure

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Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Ligands

in contact, ≤ 4 Å

S-adenosyl-L-homocysteineSAH
drugDrugBank DB01752
Chloride ionCL
3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATECPS

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 3CIX RCSB PDB: 3CIX PDBe: 3CIX UniProt: Q9X0Z6

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

FE2/S2 (INORGANIC) CLUSTERFES

Thiocyanate ionSCN

Iron/sulfur clusterSF4

+ 2 additives (Glycerin, DI(HYDROXYETHYL)ETHER)

GlycerinGOL
DrugBank DB09462
DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.