ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ddeB1 - ECOD Domain | ECOD

ECOD/Domains/e3ddeB1

e3ddeB1

UID: 000344109

PDB

Range: B:2-232
PDB: 3DDE chain B(all domains)
UniProt: Q12HR3 (all domains)
Gene: Sden_3740

Molecule: TENA/THI-4 protein, Domain of Unknown Function with a Heme Oxygenase-like Fold

3D Structure

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Related Domains

Browse other domains in Haem_oxygenas_2 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFerritin/Heme oxygenase/4-helical cytokines(150)

HH-groupFerritin/Heme oxygenase(150.1)

TT-groupHeme oxygenase/Ribonucleotide reductase(150.1.2)

FFamilyHaem_oxygenas_2(150.1.2.13)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Nitrate, Triethylene glycol, 1,2-ETHANEDIOL, …)

NitrateNO3
DrugBank DB14049
Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOL

Pfam Families

PF14518Haem_oxygenas_2

Iron-containing redox enzyme

ClanCL0230HO

External Links

ECOD PDB View: 3DDE RCSB PDB: 3DDE PDBe: 3DDE UniProt: Q12HR3

Downloads

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DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.