ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5VMT5_F1_nD2 - ECOD Domain | ECOD

ECOD/Domains/Q5VMT5_F1_nD2

Q5VMT5_F1_nD2

UID: 003466543

AlphaFold

Range: 266-1200,1246-1305
AlphaFold: AF-Q5VMT5
UniProt: Q5VMT5 (all domains)
Gene: Os06g0286351

Protein: Os06g0286351 protein (cDNA clone:J023074F05, full insert sequence)

3D Structure

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Related Domains

Browse other domains in PDS5 →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPDS5(109.4.1.257)

Pfam Families

Sister chromatid cohesion protein PDS5 protein

ClanCL0020TPR

External Links

AlphaFold DB: Q5VMT5 UniProt: Q5VMT5

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 266-1200,1246-1305