ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3c8oB1 - ECOD Domain | ECOD

ECOD/Domains/e3c8oB1

e3c8oB1

UID: 000357552

PDB

Range: B:1-161
PDB: 3C8O chain B(all domains)
UniProt: Q9I2W7 (all domains)
Gene: PA1772

Molecule: Regulator of ribonuclease activity A

3D Structure

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Related Domains

Browse other domains in RraA-like →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupThe "swivelling" beta/beta/alpha domains(2487)

HH-groupThe "swivelling" beta/beta/alpha domain(2487.1)

TT-groupThe "swivelling" beta/beta/alpha domain(2487.1.1)

FFamilyRraA-like(2487.1.1.8)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Triethylene glycol, 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, …)

Triethylene glycolPGE
DrugBank DB02327
1,2-ETHANEDIOLEDO
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF03737RraA-like

Aldolase/RraA

ClanCL0364Leu-IlvD

External Links

ECOD PDB View: 3C8O RCSB PDB: 3C8O PDBe: 3C8O UniProt: Q9I2W7

Downloads

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Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.