ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e2zisA1 - ECOD Domain | ECOD

ECOD/Domains/e2zisA1

e2zisA1

UID: 000358145

PDB

Range: A:55-368
PDB: 2ZIS chain A(all domains)
UniProt: Q04631 (all domains)
Gene: Fnta

Molecule: Protein farnesyltransferase subunit alpha

3D Structure

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Related Domains

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Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilyPPTA(109.4.1.18)

Ligands

in contact, ≤ 4 Å

Farnesyl diphosphateFPP
drugDrugBank DB07780
3-{2-[(S)-(4-cyanophenyl)(hydroxy)(1-methyl-1H-imidazol-5-yl)methyl]-5-nitro-1-benzofuran-7-yl}benzonitrileNH8

+ 2 additives (Acetic acid, Glycerol)

Pfam Families

Protein prenyltransferase alpha subunit repeat

ClanCL0020TPR

External Links

ECOD PDB View: 2ZIS RCSB PDB: 2ZIS PDBe: 2ZIS UniProt: Q04631

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Acetic acidACY

DrugBank DB03166

GlycerolGOL

Shown in the structure viewer. Drug annotations from DrugDomain.