ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3dl0B2 - ECOD Domain | ECOD

ECOD/Domains/e3dl0B2

e3dl0B2

UID: 000364791

PDB

Range: B:1-125,B:161-216
PDB: 3DL0 chain B(all domains)
UniProt: P16304 (all domains)
Gene: adk

Molecule: Adenylate kinase

3D Structure

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Related Domains

Browse other domains in ADK →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilyADK(2004.1.1.41)

Ligands

in contact, ≤ 4 Å

Bis(Adenosine)-5'-PentaphosphateAP5
drugDrugBank DB01717
Magnesium ionMG
metalwithin 5 Å only

Shown in the structure viewer.

Pfam Families

Adenylate kinase

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 3DL0 RCSB PDB: 3DL0 PDBe: 3DL0 UniProt: P16304

Downloads

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Drug annotations from DrugDomain.