ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hhlD1 - ECOD Domain | ECOD

ECOD/Domains/e3hhlD1

e3hhlD1

UID: 000367086

PDB

Range: D:1-135
PDB: 3HHL chain D(all domains)
UniProt: Q6NC90 (all domains)
Gene: RPA0582

Molecule: RPA0582

3D Structure

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Related Domains

Browse other domains in DUF1330 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupDimeric alpha+beta barrel(304.4)

TT-groupDimeric alpha+beta barrel(304.4.1)

FFamilyDUF1330(304.4.1.10)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 6 additives (Glycerin, Triethylene glycol, Pentaethylene glycol, …)

GlycerinGOL
DrugBank DB09462
Triethylene glycolPGE

Pfam Families

PF07045DUF1330

Domain of unknown function (DUF1330)

ClanCL0032Dim_A_B_barrel

External Links

ECOD PDB View: 3HHL RCSB PDB: 3HHL PDBe: 3HHL UniProt: Q6NC90

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB02327within 5 Å only

Pentaethylene glycol1PE

Nonaethylene glycol2PE

DI(HYDROXYETHYL)ETHERPEG

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.