ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3hkdB2 - ECOD Domain | ECOD

ECOD/Domains/e3hkdB2

e3hkdB2

UID: 000371220

PDB

Range: B:2-245
PDB: 3HKD chain B(all domains)
UniProt: D0VWY9 (all domains)

Molecule: Tubulin beta chain

3D Structure

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Related Domains

Browse other domains in Tubulin →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupTubulin nucleotide-binding domain-like(2003.1.6)

FFamilyTubulin(2003.1.6.1)

Ligands

in contact, ≤ 4 Å

Guanosine-5'-DiphosphateGDP
drugDrugBank DB04315
Magnesium ionMG
metal
(3Z,5S)-5-benzyl-3-[1-(phenylamino)ethylidene]pyrrolidine-2,4-dione

Pfam Families

PF00091Tubulin

Tubulin/FtsZ family, GTPase domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 3HKD RCSB PDB: 3HKD PDBe: 3HKD UniProt: D0VWY9

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.