ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3ie5B1 - ECOD Domain | ECOD

ECOD/Domains/e3ie5B1

e3ie5B1

UID: 000376885

PDB

Range: B:1-159
PDB: 3IE5 chain B(all domains)
UniProt: Q8H1L1 (all domains)
Gene: HYP1.1

Molecule: Phenolic oxidative coupling protein Hyp-1

3D Structure

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Related Domains

Browse other domains in Bet_v_1 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupTBP-like(331)

HH-groupBet v1-like(331.3)

TT-groupBet v1-like(331.3.1)

FFamilyBet_v_1(331.3.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 4 additives (Triethylene glycol, Pentaethylene glycol, DI(HYDROXYETHYL)ETHER, …)

Triethylene glycolPGE
DrugBank DB02327
Pentaethylene glycol1PE
DI(HYDROXYETHYL)ETHERPEG

Pfam Families

PF00407Bet_v_1

Pathogenesis-related protein Bet v 1 family

ClanCL0209Bet_v_1_like

External Links

ECOD PDB View: 3IE5 RCSB PDB: 3IE5 PDBe: 3IE5 UniProt: Q8H1L1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.