ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3k8dB1 - ECOD Domain | ECOD

ECOD/Domains/e3k8dB1

e3k8dB1

UID: 000377032

PDB

Range: B:2-247
PDB: 3K8D chain B(all domains)
UniProt: P04951 (all domains)
Gene: kdsB

Molecule: 3-deoxy-manno-octulosonate cytidylyltransferase

3D Structure

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Related Domains

Browse other domains in CTP_transf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyCTP_transf_3(7516.1.1.11)

Ligands

in contact, ≤ 4 Å

Cytidine-5'-TriphosphateCTP
drugDrugBank DB02431
3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acidKDO
drugDrugBank DB03548

Pfam Families

PF02348CTP_transf_3

Cytidylyltransferase

ClanCL0110GT-A

External Links

ECOD PDB View: 3K8D RCSB PDB: 3K8D PDBe: 3K8D UniProt: P04951

Downloads

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Magnesium ionMG

metal

Shown in the structure viewer. Drug annotations from DrugDomain.