KDO
3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acidd-saccharide, alpha linking
- Formula
- C8 H14 O8
- Weight
- 238.19 Da
- Type
- D-saccharide, alpha linking
- Release
- REL
68
PDB entries
62
ECOD domains in contact
67
Contacts (≤ 4 Å)
Top-binding ECOD families
| F-group | Family | Domains |
|---|---|---|
| 11.1.1.99 | V-set | 24 |
| 7512.1.1.16 | Capsule_synth | 9 |
| 7512.1.1.41 | Glyco_transf_99 | 6 |
| 7516.1.1.11 | CTP_transf_3 | 6 |
| 2006.1.1.2 | haloacid dehalogenase-like hydrolase / haloacid dehalogenase-like hydrolase | 6 |
| 2006.1.1.11 | Hydrolase_3 | 4 |
| 7523.1.1.16 | DctP | 2 |
| 207.1.1.55 | LRR_1,LRR_8 | 2 |
| 5084.5.1.1 | Porin_1 | 2 |
| 11.1.1.37 | E1_DerP2_DerF2 | 1 |
PDB entries containing KDO
| PDB | Chains | Instances |
|---|---|---|
| 1fcp | B | 2 |
| 1fi1 | B | 2 |
| 1q9w | E, F | 6 |
| 1qff | B | 2 |
| 1qfg | B | 2 |
| 1qjq | B | 2 |
| 1qkc | B | 2 |
| 2fcp | B | 2 |
| 2grx | E, F | 4 |
| 2r1y | C | 1 |
| 2r2b | C | 2 |
| 3dur | A, D | 2 |
| 3dus | A, C | 2 |
| 3duu | B, D | 2 |
| 3duv | A, B | 2 |
| 3dv4 | B | 1 |
| 3dv6 | B | 1 |
| 3fxi | E, H | 4 |
| 3hzk | C | 1 |
| 3hzm | B | 1 |
Page 1 of 4 (68 total)