ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q08BY5_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q08BY5_F1_nD1

Q08BY5_F1_nD1

UID: 003897606

AlphaFold

Range: 26-295
AlphaFold: AF-Q08BY5
UniProt: Q08BY5 (all domains)
Gene: jmjd4

Protein: 2-oxoglutarate and iron-dependent oxygenase JMJD4 (EC 1.14.11.-) (JmjC domain-containing protein 4) (Jumonji domain-containing protein 4) (Lysyl-hydroxylase JMJD4)

3D Structure

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Related Domains

Browse other domains in JmjC, Cupin_8 →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupjelly-roll(10)

HH-groupDouble-stranded beta-helix(10.12)

TT-groupDouble-stranded beta-helix(10.12.1)

FFamilyJmjC, Cupin_8(10.12.1.101)

Pfam Families

JmjC domain, hydroxylase

ClanCL0029Cupin

PF13621Cupin_8

Cupin-like domain

ClanCL0029Cupin

External Links

AlphaFold DB: Q08BY5 UniProt: Q08BY5

Representative

This domain is classified based on similarity to:

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Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 26-295