ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5F8C6_F1_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5F8C6_F1_nD1

Q5F8C6_F1_nD1

UID: 003964059

AlphaFold

Range: 1-280
AlphaFold: AF-Q5F8C6
UniProt: Q5F8C6 (all domains)
Gene: rlmJ

Protein: Ribosomal RNA large subunit methyltransferase J (EC 2.1.1.266) (23S rRNA (adenine(2030)-N6)-methyltransferase) (23S rRNA m6A2030 methyltransferase)

3D Structure

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Related Domains

Browse other domains in RsmJ →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupS-adenosyl-L-methionine-dependent methyltransferases(2003.1.5)

FFamilyRsmJ(2003.1.5.37)

Pfam Families

Ribosomal RNA large subunit methyltransferase D, RlmJ

ClanCL0063NADP_Rossmann

External Links

AlphaFold DB: Q5F8C6 UniProt: Q5F8C6

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 1-280