ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3o69A1 - ECOD Domain | ECOD

ECOD/Domains/e3o69A1

e3o69A1

UID: 000418821

PDB

Range: A:2-191
PDB: 3O69 chain A(all domains)
UniProt: P37128 (all domains)
Gene: nudK

Molecule: GDP-mannose pyrophosphatase nudK

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal
Sodium ionNA
metal

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 3O69 RCSB PDB: 3O69 PDBe: 3O69 UniProt: P37128

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

+ 1 additive (DI(HYDROXYETHYL)ETHER)

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.