ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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Q5JE80_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5JE80_nD1

Q5JE80_nD1

UID: 004305185

AlphaFold

Range: 6-320
AlphaFold: AF-Q5JE80
UniProt: Q5JE80 (all domains)
Gene: TK1135

Protein: Archaeosine synthase subunit beta (EC 4.3.2.-) (Archaeosine synthase, q0kN-tRNA lyase subunit) (Radical SAM enzyme for archaeosine formation) (RaSEA)

3D Structure

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Related Domains

Browse other domains in Radical_SAM →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRadical_SAM(2002.1.1.120)

Pfam Families

PF04055Radical_SAM

Radical SAM superfamily

ClanCL0036TIM_barrel

External Links

AlphaFold DB: Q5JE80 UniProt: Q5JE80

Representative

This domain is classified based on similarity to:

Downloads

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Domain coordinates: residues 6-320