ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3sf5D1 - ECOD Domain | ECOD

ECOD/Domains/e3sf5D1

e3sf5D1

UID: 000432252

PDB

Range: D:2-261
PDB: 3SF5 chain D(all domains)
UniProt: Q09067 (all domains)
Gene: ureH

Molecule: Urease accessory protein ureH

3D Structure

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Related Domains

Browse other domains in UreD →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupUrease accessory protein ureH(207.11)

TT-groupUrease accessory protein ureH(207.11.1)

FFamilyUreD(207.11.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 3 additives (Sulfate ion, Glycerin, DI(HYDROXYETHYL)ETHER)

Sulfate ionSO4
DrugBank DB14546
GlycerinGOL
DrugBank DB09462within 5 Å only

Pfam Families

UreD urease accessory protein

External Links

ECOD PDB View: 3SF5 RCSB PDB: 3SF5 PDBe: 3SF5 UniProt: Q09067

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHER

Shown in the structure viewer. Drug annotations from DrugDomain.