ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

Q5L553_nD1 - ECOD Domain | ECOD

ECOD/Domains/Q5L553_nD1

Q5L553_nD1

UID: 004323693

AlphaFold

Range: 6-90
AlphaFold: AF-Q5L553
UniProt: Q5L553 (all domains)

3D Structure

Loading viewer...

Related Domains

Browse other domains in GIY-YIG_UvrC →

Classification

AArchitecturea+b three layers(a.12)

XX-groupGIY-YIG endonuclease(821)

HH-groupGIY-YIG endonuclease(821.1)

TT-groupGIY-YIG endonuclease(821.1.1)

FFamilyGIY-YIG_UvrC(821.1.1.9)

Pfam Families

PF30054GIY-YIG_UvrC

UvrC-like GIY-YIG domain

ClanCL0418GIY-YIG

External Links

AlphaFold DB: Q5L553 UniProt: Q5L553

Representative

This domain is classified based on similarity to:

Downloads

Full AlphaFold Structure (PDB)Full AlphaFold Structure (mmCIF)

Domain coordinates: residues 6-90