ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e3qyyB1 - ECOD Domain | ECOD

ECOD/Domains/e3qyyB1

e3qyyB1

UID: 000434505

PDB

Range: B:130-290
PDB: 3QYY chain B(all domains)
UniProt: Q8P559 (all domains)
Gene: XCC3486

Molecule: Response regulator

3D Structure

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Related Domains

Browse other domains in GGDEF →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48)

TT-groupAdenylyl and guanylyl cyclase catalytic domain-like(304.48.1)

FFamilyGGDEF(304.48.1.14)

Ligands

in contact, ≤ 4 Å

9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one)C2E
Magnesium ionMG
metal

+ 1 additive (DI(HYDROXYETHYL)ETHER)

Pfam Families

Diguanylate cyclase, GGDEF domain

ClanCL0276Nucleot_cyclase

External Links

ECOD PDB View: 3QYY RCSB PDB: 3QYY PDBe: 3QYY UniProt: Q8P559

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DI(HYDROXYETHYL)ETHERPEG

Shown in the structure viewer. Drug annotations from DrugDomain.